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Part I — Orientation: the terminal and the filesystem

1 The shell and the terminal
2 Navigating the filesystem
3 Looking at and handling files

Part II — Pipelines and text extraction

4 Redirection and pipes
5 Selecting files: globbing, brace expansion, and find
6 grep and regular expressions
7 The stream toolkit
8 awk and sed

Part III — From commands to scripts

9 Editing in the terminal: Vim
10 Quoting and expansion
11 Permissions and execution
12 Writing scripts
13 Control flow

Part IV — Working on a cluster

14 Environment and modules
15 Remote work and moving data
16 SLURM submission scripts
17 Speedup vs resources

Part V — Automation

18 make and Makefiles

Reference

Compendium Scriptorum

Repository
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Index

By Raymond Amador

© Copyright 2026 · CC BY 4.0 (text) / MIT (code).